Cluster: HRGMv2_2446_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2446_68 | HRGMv2_2446_68_1 | 3 | 1175 | - | GH36 |
| TC | HRGMv2_2446_68 | HRGMv2_2446_68_2 | 1425 | 2267 | - | 3.A.1.1.28 |
| TC | HRGMv2_2446_68 | HRGMv2_2446_68_3 | 2267 | 3139 | - | 3.A.1.1.28 |
| TC | HRGMv2_2446_68 | HRGMv2_2446_68_4 | 3159 | 4442 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_2446_68_1
Type: CAZyme
Location: 3 - 1175 (-)
Type: CAZyme
Location: 3 - 1175 (-)
Gene ID: HRGMv2_2446_68_2
Type: TC
Location: 1425 - 2267 (-)
Type: TC
Location: 1425 - 2267 (-)
Gene ID: HRGMv2_2446_68_3
Type: TC
Location: 2267 - 3139 (-)
Type: TC
Location: 2267 - 3139 (-)
Gene ID: HRGMv2_2446_68_4
Type: TC
Location: 3159 - 4442 (-)
Type: TC
Location: 3159 - 4442 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.