Cluster: HRGMv2_2446_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2446
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2446_46 | HRGMv2_2446_46_12 | 10483 | 11157 | + | 9.B.28.1.2 |
| CAZyme | HRGMv2_2446_46 | HRGMv2_2446_46_13 | 11144 | 17806 | + | CBM62 | GH30_5 | GH43_22 |
| STP | HRGMv2_2446_46 | HRGMv2_2446_46_14 | 17876 | 18547 | + | Pribosyltran |
| pfam | HRGMv2_2446_46 | HRGMv2_2446_46_15 | 18801 | 19292 | + | CarD_TRCF_RID |
| TC | HRGMv2_2446_46 | HRGMv2_2446_46_16 | 19343 | 20746 | + | 9.A.40.2.1 |
Gene ID: HRGMv2_2446_46_12
Type: TC
Location: 10483 - 11157 (+)
Type: TC
Location: 10483 - 11157 (+)
Gene ID: HRGMv2_2446_46_13
Type: CAZyme
Location: 11144 - 17806 (+)
Type: CAZyme
Location: 11144 - 17806 (+)
Gene ID: HRGMv2_2446_46_14
Type: STP
Location: 17876 - 18547 (+)
Type: STP
Location: 17876 - 18547 (+)
Gene ID: HRGMv2_2446_46_15
Type: pfam
Location: 18801 - 19292 (+)
Type: pfam
Location: 18801 - 19292 (+)
Gene ID: HRGMv2_2446_46_16
Type: TC
Location: 19343 - 20746 (+)
Type: TC
Location: 19343 - 20746 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.