Cluster: HRGMv2_2446_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2446
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2446_40 | HRGMv2_2446_40_18 | 18463 | 20715 | + | GT35 |
| CAZyme | HRGMv2_2446_40 | HRGMv2_2446_40_19 | 20739 | 22244 | + | GH77 |
| pfam | HRGMv2_2446_40 | HRGMv2_2446_40_20 | 22572 | 26102 | + | Metallophos | Pur_ac_phosph_N | choice_anch_I |
| CAZyme | HRGMv2_2446_40 | HRGMv2_2446_40_21 | 26397 | 28181 | + | GH2 |
| STP | HRGMv2_2446_40 | HRGMv2_2446_40_22 | 28351 | 28578 | + | FeoA |
| TC | HRGMv2_2446_40 | HRGMv2_2446_40_23 | 28575 | 30620 | + | 9.A.8.1.9 |
Gene ID: HRGMv2_2446_40_18
Type: CAZyme
Location: 18463 - 20715 (+)
Type: CAZyme
Location: 18463 - 20715 (+)
Gene ID: HRGMv2_2446_40_19
Type: CAZyme
Location: 20739 - 22244 (+)
Type: CAZyme
Location: 20739 - 22244 (+)
Gene ID: HRGMv2_2446_40_20
Type: pfam
Location: 22572 - 26102 (+)
Type: pfam
Location: 22572 - 26102 (+)
Gene ID: HRGMv2_2446_40_21
Type: CAZyme
Location: 26397 - 28181 (+)
Type: CAZyme
Location: 26397 - 28181 (+)
Gene ID: HRGMv2_2446_40_22
Type: STP
Location: 28351 - 28578 (+)
Type: STP
Location: 28351 - 28578 (+)
Gene ID: HRGMv2_2446_40_23
Type: TC
Location: 28575 - 30620 (+)
Type: TC
Location: 28575 - 30620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter norwichensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.