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Cluster: HRGMv2_2446_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2446_1 HRGMv2_2446_1_79 94711 96930 - 3.A.11.3.1
pfam HRGMv2_2446_1 HRGMv2_2446_1_80 96963 98435 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC HRGMv2_2446_1 HRGMv2_2446_1_81 98656 99390 + 2.A.115.2.9
TF HRGMv2_2446_1 HRGMv2_2446_1_82 99434 100459 - HTH_3
STP HRGMv2_2446_1 HRGMv2_2446_1_83 100794 102116 + SBP_bac_1
TC HRGMv2_2446_1 HRGMv2_2446_1_84 102120 103019 + 3.A.1.1.20
TC HRGMv2_2446_1 HRGMv2_2446_1_85 102991 103842 + 3.A.1.1.20
TC HRGMv2_2446_1 HRGMv2_2446_1_86 103847 104947 + 3.A.1.1.27
CAZyme HRGMv2_2446_1 HRGMv2_2446_1_87 105041 106375 + GH32
Gene ID: HRGMv2_2446_1_79
Type: TC
Location: 94711 - 96930 (-)
Gene ID: HRGMv2_2446_1_80
Type: pfam
Location: 96963 - 98435 (-)
Gene ID: HRGMv2_2446_1_81
Type: TC
Location: 98656 - 99390 (+)
Gene ID: HRGMv2_2446_1_82
Type: TF
Location: 99434 - 100459 (-)
Gene ID: HRGMv2_2446_1_83
Type: STP
Location: 100794 - 102116 (+)
Gene ID: HRGMv2_2446_1_84
Type: TC
Location: 102120 - 103019 (+)
Gene ID: HRGMv2_2446_1_85
Type: TC
Location: 102991 - 103842 (+)
Gene ID: HRGMv2_2446_1_86
Type: TC
Location: 103847 - 104947 (+)
Gene ID: HRGMv2_2446_1_87
Type: CAZyme
Location: 105041 - 106375 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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