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Cluster: HRGMv2_2438_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2438_8 HRGMv2_2438_8_2 771 1895 + 3.A.1.2.3
TC HRGMv2_2438_8 HRGMv2_2438_8_3 1922 3415 + 3.A.1.2.3
TC HRGMv2_2438_8 HRGMv2_2438_8_4 3431 4459 + 3.A.1.2.3
CAZyme HRGMv2_2438_8 HRGMv2_2438_8_5 4478 6553 + GH3
CAZyme HRGMv2_2438_8 HRGMv2_2438_8_6 6587 8599 + GH42
TC HRGMv2_2438_8 HRGMv2_2438_8_7 8851 9510 + 2.A.115.2.8
pfam HRGMv2_2438_8 HRGMv2_2438_8_8 9579 10820 + HipA_C
NULL(UNKNOWN) HRGMv2_2438_8 HRGMv2_2438_8_9 10796 11119 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2438_8 HRGMv2_2438_8_10 11141 12481 + 2.A.66.1.33
Gene ID: HRGMv2_2438_8_2
Type: TC
Location: 771 - 1895 (+)
Gene ID: HRGMv2_2438_8_3
Type: TC
Location: 1922 - 3415 (+)
Gene ID: HRGMv2_2438_8_4
Type: TC
Location: 3431 - 4459 (+)
Gene ID: HRGMv2_2438_8_5
Type: CAZyme
Location: 4478 - 6553 (+)
Gene ID: HRGMv2_2438_8_6
Type: CAZyme
Location: 6587 - 8599 (+)
Gene ID: HRGMv2_2438_8_7
Type: TC
Location: 8851 - 9510 (+)
Gene ID: HRGMv2_2438_8_8
Type: pfam
Location: 9579 - 10820 (+)
Gene ID: HRGMv2_2438_8_9
Type:
Location: 10796 - 11119 (+)
Gene ID: HRGMv2_2438_8_10
Type: TC
Location: 11141 - 12481 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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