Cluster: HRGMv2_2438_CGC41
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_06092
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2438_65 | HRGMv2_2438_65_7 | 4469 | 5656 | + | 2.A.39.1.3 |
| TF | HRGMv2_2438_65 | HRGMv2_2438_65_8 | 5665 | 6603 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2438_65 | HRGMv2_2438_65_9 | 6741 | 8486 | + | GH13_31 |
| TC | HRGMv2_2438_65 | HRGMv2_2438_65_10 | 8621 | 10141 | + | 2.A.35.2.1 |
Gene ID: HRGMv2_2438_65_7
Type: TC
Location: 4469 - 5656 (+)
Type: TC
Location: 4469 - 5656 (+)
Gene ID: HRGMv2_2438_65_8
Type: TF
Location: 5665 - 6603 (-)
Type: TF
Location: 5665 - 6603 (-)
Gene ID: HRGMv2_2438_65_9
Type: CAZyme
Location: 6741 - 8486 (+)
Type: CAZyme
Location: 6741 - 8486 (+)
Gene ID: HRGMv2_2438_65_10
Type: TC
Location: 8621 - 10141 (+)
Type: TC
Location: 8621 - 10141 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.