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Cluster: HRGMv2_2438_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2438_60 HRGMv2_2438_60_24 18305 20122 + GH13_9
pfam HRGMv2_2438_60 HRGMv2_2438_60_25 20157 20660 - MazG
CAZyme HRGMv2_2438_60 HRGMv2_2438_60_26 20777 22099 - GH32
TC HRGMv2_2438_60 HRGMv2_2438_60_27 22120 23220 - 3.A.1.1.27
TC HRGMv2_2438_60 HRGMv2_2438_60_28 23225 24076 - 3.A.1.1.20
TC HRGMv2_2438_60 HRGMv2_2438_60_29 24048 24947 - 3.A.1.1.20
STP HRGMv2_2438_60 HRGMv2_2438_60_30 24951 26273 - SBP_bac_1
TF HRGMv2_2438_60 HRGMv2_2438_60_31 26609 27634 + LacI
TC HRGMv2_2438_60 HRGMv2_2438_60_32 27714 28934 + 2.A.55.3.2
Gene ID: HRGMv2_2438_60_24
Type: CAZyme
Location: 18305 - 20122 (+)
Gene ID: HRGMv2_2438_60_25
Type: pfam
Location: 20157 - 20660 (-)
Gene ID: HRGMv2_2438_60_26
Type: CAZyme
Location: 20777 - 22099 (-)
Gene ID: HRGMv2_2438_60_27
Type: TC
Location: 22120 - 23220 (-)
Gene ID: HRGMv2_2438_60_28
Type: TC
Location: 23225 - 24076 (-)
Gene ID: HRGMv2_2438_60_29
Type: TC
Location: 24048 - 24947 (-)
Gene ID: HRGMv2_2438_60_30
Type: STP
Location: 24951 - 26273 (-)
Gene ID: HRGMv2_2438_60_31
Type: TF
Location: 26609 - 27634 (+)
Gene ID: HRGMv2_2438_60_32
Type: TC
Location: 27714 - 28934 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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