Cluster: HRGMv2_2438_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2438
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2438_59 | HRGMv2_2438_59_87 | 99108 | 100403 | - | GT4 |
| pfam | HRGMv2_2438_59 | HRGMv2_2438_59_88 | 100420 | 100929 | - | VTT_dom |
| TC | HRGMv2_2438_59 | HRGMv2_2438_59_89 | 101021 | 102034 | - | 9.B.97.1.3 |
| pfam | HRGMv2_2438_59 | HRGMv2_2438_59_90 | 102052 | 103269 | - | IMS | IMS_C |
| TC | HRGMv2_2438_59 | HRGMv2_2438_59_91 | 103305 | 105908 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_2438_59_87
Type: CAZyme
Location: 99108 - 100403 (-)
Type: CAZyme
Location: 99108 - 100403 (-)
Gene ID: HRGMv2_2438_59_88
Type: pfam
Location: 100420 - 100929 (-)
Type: pfam
Location: 100420 - 100929 (-)
Gene ID: HRGMv2_2438_59_89
Type: TC
Location: 101021 - 102034 (-)
Type: TC
Location: 101021 - 102034 (-)
Gene ID: HRGMv2_2438_59_90
Type: pfam
Location: 102052 - 103269 (-)
Type: pfam
Location: 102052 - 103269 (-)
Gene ID: HRGMv2_2438_59_91
Type: TC
Location: 103305 - 105908 (-)
Type: TC
Location: 103305 - 105908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.