Cluster: HRGMv2_2438_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_00618
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2438_59 | HRGMv2_2438_59_21 | 20292 | 21377 | - | GT2 |
| TC | HRGMv2_2438_59 | HRGMv2_2438_59_22 | 21374 | 22912 | - | 2.A.66.1.40 |
| pfam | HRGMv2_2438_59 | HRGMv2_2438_59_23 | 22925 | 23668 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_2438_59 | HRGMv2_2438_59_24 | 23625 | 24680 | - | GT2 |
| CAZyme | HRGMv2_2438_59 | HRGMv2_2438_59_25 | 24682 | 25731 | - | GT2 |
Gene ID: HRGMv2_2438_59_21
Type: CAZyme
Location: 20292 - 21377 (-)
Type: CAZyme
Location: 20292 - 21377 (-)
Gene ID: HRGMv2_2438_59_22
Type: TC
Location: 21374 - 22912 (-)
Type: TC
Location: 21374 - 22912 (-)
Gene ID: HRGMv2_2438_59_23
Type: pfam
Location: 22925 - 23668 (-)
Type: pfam
Location: 22925 - 23668 (-)
Gene ID: HRGMv2_2438_59_24
Type: CAZyme
Location: 23625 - 24680 (-)
Type: CAZyme
Location: 23625 - 24680 (-)
Gene ID: HRGMv2_2438_59_25
Type: CAZyme
Location: 24682 - 25731 (-)
Type: CAZyme
Location: 24682 - 25731 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.