Cluster: HRGMv2_2438_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_00374
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2438_54 | HRGMv2_2438_54_11 | 14164 | 15432 | - | 3.A.1.103.5 |
| TC | HRGMv2_2438_54 | HRGMv2_2438_54_12 | 15449 | 16288 | - | 3.A.1.103.5 |
| CAZyme | HRGMv2_2438_54 | HRGMv2_2438_54_13 | 16310 | 17341 | - | GT2 |
| CAZyme | HRGMv2_2438_54 | HRGMv2_2438_54_14 | 17328 | 18332 | - | GT2 |
| CAZyme | HRGMv2_2438_54 | HRGMv2_2438_54_15 | 18339 | 19184 | - | GT8 |
| CAZyme | HRGMv2_2438_54 | HRGMv2_2438_54_16 | 19224 | 20183 | - | GT2 |
Gene ID: HRGMv2_2438_54_11
Type: TC
Location: 14164 - 15432 (-)
Type: TC
Location: 14164 - 15432 (-)
Gene ID: HRGMv2_2438_54_12
Type: TC
Location: 15449 - 16288 (-)
Type: TC
Location: 15449 - 16288 (-)
Gene ID: HRGMv2_2438_54_13
Type: CAZyme
Location: 16310 - 17341 (-)
Type: CAZyme
Location: 16310 - 17341 (-)
Gene ID: HRGMv2_2438_54_14
Type: CAZyme
Location: 17328 - 18332 (-)
Type: CAZyme
Location: 17328 - 18332 (-)
Gene ID: HRGMv2_2438_54_15
Type: CAZyme
Location: 18339 - 19184 (-)
Type: CAZyme
Location: 18339 - 19184 (-)
Gene ID: HRGMv2_2438_54_16
Type: CAZyme
Location: 19224 - 20183 (-)
Type: CAZyme
Location: 19224 - 20183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.