Cluster: HRGMv2_2438_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_06120
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2438_47 | HRGMv2_2438_47_18 | 16361 | 17695 | + | 2.A.66.1.26 |
| CAZyme | HRGMv2_2438_47 | HRGMv2_2438_47_19 | 17749 | 18864 | - | GH18 |
| TC | HRGMv2_2438_47 | HRGMv2_2438_47_20 | 18919 | 20775 | - | 3.A.1.135.9 |
| TC | HRGMv2_2438_47 | HRGMv2_2438_47_21 | 20777 | 22510 | - | 3.A.1.135.9 |
Gene ID: HRGMv2_2438_47_18
Type: TC
Location: 16361 - 17695 (+)
Type: TC
Location: 16361 - 17695 (+)
Gene ID: HRGMv2_2438_47_19
Type: CAZyme
Location: 17749 - 18864 (-)
Type: CAZyme
Location: 17749 - 18864 (-)
Gene ID: HRGMv2_2438_47_20
Type: TC
Location: 18919 - 20775 (-)
Type: TC
Location: 18919 - 20775 (-)
Gene ID: HRGMv2_2438_47_21
Type: TC
Location: 20777 - 22510 (-)
Type: TC
Location: 20777 - 22510 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.