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Cluster: HRGMv2_2438_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2438_41 HRGMv2_2438_41_114 123907 125244 + 3.A.1.1.21
TC HRGMv2_2438_41 HRGMv2_2438_41_115 125311 126198 + 3.A.1.1.7
TC HRGMv2_2438_41 HRGMv2_2438_41_116 126198 127031 + 3.A.1.1.41
pfam HRGMv2_2438_41 HRGMv2_2438_41_117 127066 128172 + Semialdhyde_dh | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_2438_41 HRGMv2_2438_41_118 128212 130932 + CBM40 | CBM40 | GH33
pfam HRGMv2_2438_41 HRGMv2_2438_41_119 130964 131887 + DHDPS
sulfatase HRGMv2_2438_41 HRGMv2_2438_41_120 132076 132807 + S1_9
TC HRGMv2_2438_41 HRGMv2_2438_41_121 132812 133555 + 9.B.158.1.1
Gene ID: HRGMv2_2438_41_114
Type: TC
Location: 123907 - 125244 (+)
Gene ID: HRGMv2_2438_41_115
Type: TC
Location: 125311 - 126198 (+)
Gene ID: HRGMv2_2438_41_116
Type: TC
Location: 126198 - 127031 (+)
Gene ID: HRGMv2_2438_41_117
Type: pfam
Location: 127066 - 128172 (+)
Gene ID: HRGMv2_2438_41_118
Type: CAZyme
Location: 128212 - 130932 (+)
Gene ID: HRGMv2_2438_41_119
Type: pfam
Location: 130964 - 131887 (+)
Gene ID: HRGMv2_2438_41_120
Type: sulfatase
Location: 132076 - 132807 (+)
Gene ID: HRGMv2_2438_41_121
Type: TC
Location: 132812 - 133555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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