Cluster: HRGMv2_2438_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_06125
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2438_41 | HRGMv2_2438_41_9 | 7564 | 8244 | + | 3.A.1.125.3 |
| pfam | HRGMv2_2438_41 | HRGMv2_2438_41_10 | 8241 | 10703 | + | FtsX | FtsX |
| CAZyme | HRGMv2_2438_41 | HRGMv2_2438_41_11 | 10778 | 12211 | - | CE4 |
| NULL(UNKNOWN) | HRGMv2_2438_41 | HRGMv2_2438_41_12 | 12423 | 13502 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2438_41 | HRGMv2_2438_41_13 | 13407 | 14153 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2438_41 | HRGMv2_2438_41_14 | 14723 | 15382 | + | 3.A.2.1.5 |
Gene ID: HRGMv2_2438_41_9
Type: TC
Location: 7564 - 8244 (+)
Type: TC
Location: 7564 - 8244 (+)
Gene ID: HRGMv2_2438_41_10
Type: pfam
Location: 8241 - 10703 (+)
Type: pfam
Location: 8241 - 10703 (+)
Gene ID: HRGMv2_2438_41_11
Type: CAZyme
Location: 10778 - 12211 (-)
Type: CAZyme
Location: 10778 - 12211 (-)
Gene ID: HRGMv2_2438_41_12
Type:
Location: 12423 - 13502 (+)
Type:
Location: 12423 - 13502 (+)
Gene ID: HRGMv2_2438_41_13
Type:
Location: 13407 - 14153 (-)
Type:
Location: 13407 - 14153 (-)
Gene ID: HRGMv2_2438_41_14
Type: TC
Location: 14723 - 15382 (+)
Type: TC
Location: 14723 - 15382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.