Cluster: HRGMv2_2438_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_01243
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2438_39 | HRGMv2_2438_39_100 | 109784 | 112063 | - | GH31_3 |
| TF | HRGMv2_2438_39 | HRGMv2_2438_39_101 | 112085 | 113125 | - | LacI |
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_102 | 113209 | 114078 | - | 3.A.1.1.45 |
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_103 | 114078 | 114920 | - | 3.A.1.1.45 |
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_104 | 114994 | 116340 | - | 3.A.1.1.45 |
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_105 | 116629 | 119184 | - | 3.A.9.1.2 |
Gene ID: HRGMv2_2438_39_100
Type: CAZyme
Location: 109784 - 112063 (-)
Type: CAZyme
Location: 109784 - 112063 (-)
Gene ID: HRGMv2_2438_39_101
Type: TF
Location: 112085 - 113125 (-)
Type: TF
Location: 112085 - 113125 (-)
Gene ID: HRGMv2_2438_39_102
Type: TC
Location: 113209 - 114078 (-)
Type: TC
Location: 113209 - 114078 (-)
Gene ID: HRGMv2_2438_39_103
Type: TC
Location: 114078 - 114920 (-)
Type: TC
Location: 114078 - 114920 (-)
Gene ID: HRGMv2_2438_39_104
Type: TC
Location: 114994 - 116340 (-)
Type: TC
Location: 114994 - 116340 (-)
Gene ID: HRGMv2_2438_39_105
Type: TC
Location: 116629 - 119184 (-)
Type: TC
Location: 116629 - 119184 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.