Cluster: HRGMv2_2438_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2438
- CGC Family ID: CGCFAM_04926
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_45 | 49395 | 50777 | + | 3.A.1.1.41 |
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_46 | 50792 | 51670 | + | 3.A.1.1.20 |
| TC | HRGMv2_2438_39 | HRGMv2_2438_39_47 | 51683 | 52504 | + | 3.A.1.1.39 |
| CAZyme | HRGMv2_2438_39 | HRGMv2_2438_39_48 | 52588 | 54981 | + | GH31_15 |
Gene ID: HRGMv2_2438_39_45
Type: TC
Location: 49395 - 50777 (+)
Type: TC
Location: 49395 - 50777 (+)
Gene ID: HRGMv2_2438_39_46
Type: TC
Location: 50792 - 51670 (+)
Type: TC
Location: 50792 - 51670 (+)
Gene ID: HRGMv2_2438_39_47
Type: TC
Location: 51683 - 52504 (+)
Type: TC
Location: 51683 - 52504 (+)
Gene ID: HRGMv2_2438_39_48
Type: CAZyme
Location: 52588 - 54981 (+)
Type: CAZyme
Location: 52588 - 54981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.