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Cluster: HRGMv2_2438_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2438_20 HRGMv2_2438_20_17 23087 24760 - GH13_31
CAZyme HRGMv2_2438_20 HRGMv2_2438_20_18 24757 26508 - CBM34 | GH13_20
CAZyme HRGMv2_2438_20 HRGMv2_2438_20_19 26556 28532 - GH133
CAZyme HRGMv2_2438_20 HRGMv2_2438_20_20 28529 30586 - GH13_14
TC HRGMv2_2438_20 HRGMv2_2438_20_21 30764 31636 - 3.A.1.1.27
TC HRGMv2_2438_20 HRGMv2_2438_20_22 31639 33018 - 3.A.1.1.27
TC HRGMv2_2438_20 HRGMv2_2438_20_23 33035 34270 - 3.A.1.1.2
Gene ID: HRGMv2_2438_20_17
Type: CAZyme
Location: 23087 - 24760 (-)
Gene ID: HRGMv2_2438_20_18
Type: CAZyme
Location: 24757 - 26508 (-)
Gene ID: HRGMv2_2438_20_19
Type: CAZyme
Location: 26556 - 28532 (-)
Gene ID: HRGMv2_2438_20_20
Type: CAZyme
Location: 28529 - 30586 (-)
Gene ID: HRGMv2_2438_20_21
Type: TC
Location: 30764 - 31636 (-)
Gene ID: HRGMv2_2438_20_22
Type: TC
Location: 31639 - 33018 (-)
Gene ID: HRGMv2_2438_20_23
Type: TC
Location: 33035 - 34270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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