Cluster: HRGMv2_2438_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2438
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2438_15 | HRGMv2_2438_15_23 | 28472 | 30424 | - | GH13_4 |
| CAZyme | HRGMv2_2438_15 | HRGMv2_2438_15_24 | 30443 | 32626 | - | GH36 |
| TC | HRGMv2_2438_15 | HRGMv2_2438_15_25 | 32761 | 33603 | - | 3.A.1.1.28 |
| TC | HRGMv2_2438_15 | HRGMv2_2438_15_26 | 33603 | 34475 | - | 3.A.1.1.28 |
| TC | HRGMv2_2438_15 | HRGMv2_2438_15_27 | 34495 | 35778 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_2438_15_23
Type: CAZyme
Location: 28472 - 30424 (-)
Type: CAZyme
Location: 28472 - 30424 (-)
Gene ID: HRGMv2_2438_15_24
Type: CAZyme
Location: 30443 - 32626 (-)
Type: CAZyme
Location: 30443 - 32626 (-)
Gene ID: HRGMv2_2438_15_25
Type: TC
Location: 32761 - 33603 (-)
Type: TC
Location: 32761 - 33603 (-)
Gene ID: HRGMv2_2438_15_26
Type: TC
Location: 33603 - 34475 (-)
Type: TC
Location: 33603 - 34475 (-)
Gene ID: HRGMv2_2438_15_27
Type: TC
Location: 34495 - 35778 (-)
Type: TC
Location: 34495 - 35778 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.