Cluster: HRGMv2_2415_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2415
- CGC Family ID: CGCFAM_00074
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2415_29 | HRGMv2_2415_29_29 | 23682 | 24929 | + | GT4 |
| CAZyme | HRGMv2_2415_29 | HRGMv2_2415_29_30 | 24892 | 25725 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2415_29 | HRGMv2_2415_29_31 | 25692 | 26993 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2415_29 | HRGMv2_2415_29_32 | 26990 | 27748 | + | ABC2_membrane |
| TC | HRGMv2_2415_29 | HRGMv2_2415_29_33 | 27763 | 28539 | + | 3.A.1.103.1 |
| pfam | HRGMv2_2415_29 | HRGMv2_2415_29_34 | 28536 | 30578 | + | Hydrolase |
| TC | HRGMv2_2415_29 | HRGMv2_2415_29_35 | 30620 | 31975 | + | 9.B.18.1.3 |
Gene ID: HRGMv2_2415_29_29
Type: CAZyme
Location: 23682 - 24929 (+)
Type: CAZyme
Location: 23682 - 24929 (+)
Gene ID: HRGMv2_2415_29_30
Type: CAZyme
Location: 24892 - 25725 (+)
Type: CAZyme
Location: 24892 - 25725 (+)
Gene ID: HRGMv2_2415_29_31
Type:
Location: 25692 - 26993 (+)
Type:
Location: 25692 - 26993 (+)
Gene ID: HRGMv2_2415_29_32
Type: pfam
Location: 26990 - 27748 (+)
Type: pfam
Location: 26990 - 27748 (+)
Gene ID: HRGMv2_2415_29_33
Type: TC
Location: 27763 - 28539 (+)
Type: TC
Location: 27763 - 28539 (+)
Gene ID: HRGMv2_2415_29_34
Type: pfam
Location: 28536 - 30578 (+)
Type: pfam
Location: 28536 - 30578 (+)
Gene ID: HRGMv2_2415_29_35
Type: TC
Location: 30620 - 31975 (+)
Type: TC
Location: 30620 - 31975 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.