PROTEIN: HRGMv2_2415_29_31
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Protein File & Metadata
Source:
HRGMv2_2415_29_31.pdb
Genome ID:
Protein ID:
HRGMv2_2415_29_31
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Protein Sequence
MDRTHTTENA MMETARSCAR EILAPAMVEF VKWILRSAGE RNIRRVYFLA RDGWPMYRAA 60 RILSRAVEPA VDCRYLCCSR YALRIPCFSL MEKQEIADQI CVGGVDVTLQ KLLKRGGLDD 120 GEVRRAAEEL GRETELDRIL PYREIDRLRE SLMEGELFWS YVYRHAGEAY GPASAWIIQE 180 GLLEPVRYAV ADSGWTGSMQ LTLNRLLDSM SYRGKLEGFY YGLYHIPEKA DPRDYHVYYF 240 GPEGMIKRKV YFSNCLFESV FSQPEGMCIG YERTEEGVAP LREEVRPGNG AILDCVTREV 300 EEQAGAEKES LPERLLDWHI QEPGDAQRRL ARLMARPTRK EAEVFGGMAF SDDVLDGGET 360 LAAPLSEEQI RENRFLARGL SMSGLCREPV HESAWMEGSI LLCGRHVGRH LWHNRLYKYA 420 LYYRKQLRER KKR 433
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 11 | 412 | 239 | 631 | 0.6397 |
0.8378 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 3 | 420 | 1 | 403 | 0.5716 |
0.7491 |
| AF-W0DNV7-F1-model_v4 | GT2 | 10 | 428 | 670 | 1091 | 0.5614 |
0.8311 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 11 | 427 | 651 | 1067 | 0.5608 |
0.8289 |
| A0A1I7GMF6 | GT2 | 10 | 423 | 668 | 1083 | 0.5589 |
0.8352 |
| A0A9J7AXY3 | GT2 | 4 | 423 | 2 | 399 | 0.5564 |
0.7719 |
| V4JBH5 | GT2 | 9 | 420 | 1 | 398 | 0.5483 |
0.7691 |
| A0A974WXG9 | GT4 | 12 | 417 | 675 | 1078 | 0.5454 |
0.838 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 9 | 420 | 8 | 405 | 0.5367 |
0.7637 |
| QRK05458.1 | GT4 | 9 | 430 | 268 | 988 | 0.5215 |
0.785 |
| AF-W8KPG0-F1-model_v4 | GT2 | 11 | 421 | 7 | 398 | 0.5213 |
0.7607 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 3 | 420 | 1 | 403 | 0.5716 |
0.7491 |
| A0A2I6S8V6 | GT2 | 11 | 427 | 651 | 1067 | 0.5608 |
0.8289 |
| A0A1I7GMF6 | GT2 | 10 | 423 | 668 | 1083 | 0.5589 |
0.8352 |
| A0A9J7AXY3 | GT2 | 4 | 423 | 2 | 399 | 0.5564 |
0.7719 |
| V4JBH5 | GT2 | 9 | 420 | 1 | 398 | 0.5483 |
0.7691 |
| A0A974WXG9 | GT4 | 12 | 417 | 675 | 1078 | 0.5454 |
0.838 |
| A0A0H3KC95 | GT2 | 9 | 420 | 8 | 405 | 0.5367 |
0.7637 |
| QRK05458.1 | GT4 | 9 | 430 | 268 | 988 | 0.5215 |
0.785 |
| W8KPG0 | GT2 | 11 | 421 | 7 | 398 | 0.5213 |
0.7607 |
| A6M2M4 | GT2 | 11 | 431 | 243 | 917 | 0.5119 |
0.7998 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 13 | 348 | 253 | 591 | 0.5629 |
0.8293 |
| 8a0m-assembly1.cif.gz_B | 8 | 416 | 499 | 876 | 0.5215 |
0.8184 |
| 8a0m-assembly2.cif.gz_C | 8 | 416 | 633 | 1024 | 0.5175 |
0.8187 |
| 8a0c-assembly1.cif.gz_A | 8 | 416 | 637 | 1028 | 0.5171 |
0.8187 |
| 8a0m-assembly1.cif.gz_A | 8 | 416 | 632 | 1023 | 0.5166 |
0.8171 |
| 8a0c-assembly1.cif.gz_B | 8 | 416 | 637 | 1025 | 0.5097 |
0.8122 |
| 8a0m-assembly2.cif.gz_D | 8 | 416 | 528 | 887 | 0.4905 |
0.8066 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.