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Cluster: HRGMv2_2412_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_44 47232 49568 + GT4 | GT4
NULL(UNKNOWN) HRGMv2_2412_4 HRGMv2_2412_4_45 49703 50476 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_46 50485 51576 + GT4
pfam HRGMv2_2412_4 HRGMv2_2412_4_47 51634 52593 + ATPgrasp_TupA
peptidase HRGMv2_2412_4 HRGMv2_2412_4_48 52607 54490 + C44.001
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_49 54492 55604 + GT4
NULL(UNKNOWN) HRGMv2_2412_4 HRGMv2_2412_4_50 55577 56674 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2412_4 HRGMv2_2412_4_51 56720 58597 + C44.001
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_52 58616 59575 + GT11
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_53 59579 60511 + GT11
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_54 60521 61540 + GT2
TC HRGMv2_2412_4 HRGMv2_2412_4_55 61643 63406 + 3.A.1.106.15
NULL(UNKNOWN) HRGMv2_2412_4 HRGMv2_2412_4_56 63442 64281 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_57 64283 65329 + GT11
pfam HRGMv2_2412_4 HRGMv2_2412_4_58 65322 66098 + DUF5672
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_59 66145 67086 + GT17
TC HRGMv2_2412_4 HRGMv2_2412_4_60 67146 68555 + 9.B.18.1.2
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_61 68607 69695 + GT4
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_62 69688 70743 + GT2
pfam HRGMv2_2412_4 HRGMv2_2412_4_63 70757 71935 + PS_pyruv_trans
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_64 71957 72961 + GT2
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_65 73035 74096 + GH105
NULL(UNKNOWN) HRGMv2_2412_4 HRGMv2_2412_4_66 74111 75691 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_67 75709 76608 + GT11
NULL(UNKNOWN) HRGMv2_2412_4 HRGMv2_2412_4_68 76654 77862 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_69 77864 79783 + GT26 | GT4
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_70 79793 80995 + GT4
pfam HRGMv2_2412_4 HRGMv2_2412_4_71 81015 82016 + Radical_SAM | SPASM
pfam HRGMv2_2412_4 HRGMv2_2412_4_72 82029 83102 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_73 83104 84144 + GT2
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_74 84179 85231 + GT2
pfam HRGMv2_2412_4 HRGMv2_2412_4_75 85191 86075 + ATPgrasp_TupA
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_76 86102 86950 + GT11
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_77 86958 88040 + GT10
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_78 88048 89229 + GT4
TC HRGMv2_2412_4 HRGMv2_2412_4_79 89219 90970 + 3.A.1.106.15
STP HRGMv2_2412_4 HRGMv2_2412_4_80 90980 92089 + Aminotran_1_2
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_81 92106 93095 + GT2
pfam HRGMv2_2412_4 HRGMv2_2412_4_82 93092 93820 + WbqC
CAZyme HRGMv2_2412_4 HRGMv2_2412_4_83 93807 95297 + GT11
TC HRGMv2_2412_4 HRGMv2_2412_4_84 95358 96383 + 9.B.97.1.2
Gene ID: HRGMv2_2412_4_44
Type: CAZyme
Location: 47232 - 49568 (+)
Gene ID: HRGMv2_2412_4_45
Type:
Location: 49703 - 50476 (+)
Gene ID: HRGMv2_2412_4_46
Type: CAZyme
Location: 50485 - 51576 (+)
Gene ID: HRGMv2_2412_4_47
Type: pfam
Location: 51634 - 52593 (+)
Gene ID: HRGMv2_2412_4_48
Type: peptidase
Location: 52607 - 54490 (+)
Gene ID: HRGMv2_2412_4_49
Type: CAZyme
Location: 54492 - 55604 (+)
Gene ID: HRGMv2_2412_4_50
Type:
Location: 55577 - 56674 (+)
Gene ID: HRGMv2_2412_4_51
Type: peptidase
Location: 56720 - 58597 (+)
Gene ID: HRGMv2_2412_4_52
Type: CAZyme
Location: 58616 - 59575 (+)
Gene ID: HRGMv2_2412_4_53
Type: CAZyme
Location: 59579 - 60511 (+)
Gene ID: HRGMv2_2412_4_54
Type: CAZyme
Location: 60521 - 61540 (+)
Gene ID: HRGMv2_2412_4_55
Type: TC
Location: 61643 - 63406 (+)
Gene ID: HRGMv2_2412_4_56
Type:
Location: 63442 - 64281 (+)
Gene ID: HRGMv2_2412_4_57
Type: CAZyme
Location: 64283 - 65329 (+)
Gene ID: HRGMv2_2412_4_58
Type: pfam
Location: 65322 - 66098 (+)
Gene ID: HRGMv2_2412_4_59
Type: CAZyme
Location: 66145 - 67086 (+)
Gene ID: HRGMv2_2412_4_60
Type: TC
Location: 67146 - 68555 (+)
Gene ID: HRGMv2_2412_4_61
Type: CAZyme
Location: 68607 - 69695 (+)
Gene ID: HRGMv2_2412_4_62
Type: CAZyme
Location: 69688 - 70743 (+)
Gene ID: HRGMv2_2412_4_63
Type: pfam
Location: 70757 - 71935 (+)
Gene ID: HRGMv2_2412_4_64
Type: CAZyme
Location: 71957 - 72961 (+)
Gene ID: HRGMv2_2412_4_65
Type: CAZyme
Location: 73035 - 74096 (+)
Gene ID: HRGMv2_2412_4_66
Type:
Location: 74111 - 75691 (+)
Gene ID: HRGMv2_2412_4_67
Type: CAZyme
Location: 75709 - 76608 (+)
Gene ID: HRGMv2_2412_4_68
Type:
Location: 76654 - 77862 (+)
Gene ID: HRGMv2_2412_4_69
Type: CAZyme
Location: 77864 - 79783 (+)
Gene ID: HRGMv2_2412_4_70
Type: CAZyme
Location: 79793 - 80995 (+)
Gene ID: HRGMv2_2412_4_71
Type: pfam
Location: 81015 - 82016 (+)
Gene ID: HRGMv2_2412_4_72
Type: pfam
Location: 82029 - 83102 (+)
Gene ID: HRGMv2_2412_4_73
Type: CAZyme
Location: 83104 - 84144 (+)
Gene ID: HRGMv2_2412_4_74
Type: CAZyme
Location: 84179 - 85231 (+)
Gene ID: HRGMv2_2412_4_75
Type: pfam
Location: 85191 - 86075 (+)
Gene ID: HRGMv2_2412_4_76
Type: CAZyme
Location: 86102 - 86950 (+)
Gene ID: HRGMv2_2412_4_77
Type: CAZyme
Location: 86958 - 88040 (+)
Gene ID: HRGMv2_2412_4_78
Type: CAZyme
Location: 88048 - 89229 (+)
Gene ID: HRGMv2_2412_4_79
Type: TC
Location: 89219 - 90970 (+)
Gene ID: HRGMv2_2412_4_80
Type: STP
Location: 90980 - 92089 (+)
Gene ID: HRGMv2_2412_4_81
Type: CAZyme
Location: 92106 - 93095 (+)
Gene ID: HRGMv2_2412_4_82
Type: pfam
Location: 93092 - 93820 (+)
Gene ID: HRGMv2_2412_4_83
Type: CAZyme
Location: 93807 - 95297 (+)
Gene ID: HRGMv2_2412_4_84
Type: TC
Location: 95358 - 96383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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