PROTEIN: HRGMv2_2412_4_56
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Protein File & Metadata
Source:
HRGMv2_2412_4_56.pdb
Genome ID:
Protein ID:
HRGMv2_2412_4_56
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Protein Sequence
MKTDNFFVIH NYNMIPLNLV EYCRDYIIYD ASDQPGVREQ LKKAGLKYIP VKNTGHNITS 60 YFSYFDTEYE HLPEVICLCK GNMIGRHCSK EYFDKVYNNT YFTYLYEDKP KWPGLTKAVQ 120 EGIKEEELAF LVSESQYVEK NTSWYVGSPN HPHWYFDNFD DLLTFIYKDP VIPKWCLFSP 180 GACYIVRREQ VQKHSPVFYR NLCKIMNYDL DPNFPSEAHQ IERMLPLIFE ASYEENEWMN 240 NEELFEEKLA ERKEFLKKKE EWNKKRLKRI RKLFGQKGY 279
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1C9B8-F1-model_v4 | 2 | 232 | 15 | 239 | 0.6074 |
0.7652 |
| AF-A0A0D2GX45-F1-model_v4 | 3 | 247 | 25 | 285 | 0.598 |
0.7226 |
| AF-A0A1C1CUJ2-F1-model_v4 | 3 | 232 | 32 | 272 | 0.5731 |
0.7398 |
| AF-U7Q1D0-F1-model_v4 | 3 | 233 | 80 | 295 | 0.5238 |
0.7266 |
| AF-A0A1C1D2H8-F1-model_v4 | 2 | 233 | 61 | 277 | 0.495 |
0.7196 |
| AF-C1H2A3-F1-model_v4 | 2 | 233 | 100 | 308 | 0.4868 |
0.7398 |
| AF-C0NT87-F1-model_v4 | 3 | 233 | 124 | 364 | 0.468 |
0.6915 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6M5YEK2 | GT2 | 1 | 263 | 12 | 238 | 0.5081 |
0.5972 |
| A0A2I8VKZ9 | GT2 | 1 | 259 | 4 | 269 | 0.4842 |
0.5425 |
| A0A6J5M9V0 | GT2 | 2 | 240 | 471 | 693 | 0.445 |
0.7859 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.