Cluster: HRGMv2_2412_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2412
- CGC Family ID: CGCFAM_10073
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2412_33 | HRGMv2_2412_33_13 | 14573 | 15478 | + | 3.A.1.132.6 |
| pfam | HRGMv2_2412_33 | HRGMv2_2412_33_14 | 15450 | 17756 | + | DUF6449 |
| NULL(UNKNOWN) | HRGMv2_2412_33 | HRGMv2_2412_33_15 | 17851 | 19065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2412_33 | HRGMv2_2412_33_16 | 19054 | 20781 | - | GT39 |
| pfam | HRGMv2_2412_33 | HRGMv2_2412_33_17 | 20890 | 22209 | + | Enolase_C | Enolase_N |
| CAZyme | HRGMv2_2412_33 | HRGMv2_2412_33_18 | 22260 | 23675 | + | GH25 |
Gene ID: HRGMv2_2412_33_13
Type: TC
Location: 14573 - 15478 (+)
Type: TC
Location: 14573 - 15478 (+)
Gene ID: HRGMv2_2412_33_14
Type: pfam
Location: 15450 - 17756 (+)
Type: pfam
Location: 15450 - 17756 (+)
Gene ID: HRGMv2_2412_33_15
Type:
Location: 17851 - 19065 (+)
Type:
Location: 17851 - 19065 (+)
Gene ID: HRGMv2_2412_33_16
Type: CAZyme
Location: 19054 - 20781 (-)
Type: CAZyme
Location: 19054 - 20781 (-)
Gene ID: HRGMv2_2412_33_17
Type: pfam
Location: 20890 - 22209 (+)
Type: pfam
Location: 20890 - 22209 (+)
Gene ID: HRGMv2_2412_33_18
Type: CAZyme
Location: 22260 - 23675 (+)
Type: CAZyme
Location: 22260 - 23675 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp900554925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.