PROTEIN: HRGMv2_2412_33_15
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Protein File & Metadata
Source:
HRGMv2_2412_33_15.pdb
Genome ID:
Protein ID:
HRGMv2_2412_33_15
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Protein Sequence
MEINMKERIL DRVMFRDLEA GKIKLKVVDM VFIACLFVFA FMIRWKLMPV ESADYWGFLE 60 DWMEQIRTHG GFSSLKYQIS NYSSPYMYLM CLLSYLTTND LYGLKLISVF FDYAASVAVF 120 LILYQITGNL RKSIMGMALL LLSPTVILDS AYWCQCDIIY TAFILYALYY FFKDNSRWCL 180 IFVGISFAFK LQALFIVPFL IIMWLKRKTV RLSDFLWIPI IYVISAIPAW IAGRDFKELM 240 LIYFDQAGTY PWGTLEYPNI YALLGEAMPD MRHAQQVSGA GTFMTIIILG GIAYYLYTKN 300 VNLTNELMIT LALFTVAVTV YSLPHMHERY GFLIDLLAIL YGTLNVKKLP IACGFMLVSV 360 LSFMPYLIAV HIVPIQYIAI AQLGLIVYVG YDLYAQIKVN SLQY 404
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-E9PT91-F1-model_v4 | 7 | 404 | 1 | 525 | 0.714 |
0.8313 |
| AF-Q6P8H8-F1-model_v4 | 13 | 404 | 3 | 525 | 0.7123 |
0.8407 |
| AF-A0A0J9XRE5-F1-model_v4 | 11 | 401 | 13 | 525 | 0.7093 |
0.8465 |
| AF-Q9BVK2-F1-model_v4 | 13 | 404 | 5 | 526 | 0.7093 |
0.8371 |
| AF-Q566T2-F1-model_v4 | 16 | 402 | 1 | 520 | 0.7083 |
0.8445 |
| AF-Q54IA4-F1-model_v4 | 12 | 400 | 4 | 436 | 0.7063 |
0.7831 |
| AF-A0A044UW34-F1-model_v4 | 12 | 400 | 16 | 526 | 0.6981 |
0.8385 |
| AF-C0NKR5-F1-model_v4 | 4 | 404 | 13 | 593 | 0.6847 |
0.8378 |
| AF-A0A1D6HG82-F1-model_v4 | 2 | 403 | 52 | 522 | 0.6389 |
0.7398 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P2U802-F1-model_v4 | GT50 | 20 | 404 | 1 | 402 | 0.7532 |
0.8092 |
| AF-Q6CRE7-F1-model_v4 | GT50 | 20 | 404 | 1 | 402 | 0.753 |
0.8092 |
| AF-G8ZVT2-F1-model_v4 | GT50 | 25 | 404 | 1 | 405 | 0.7488 |
0.8166 |
| AF-A0A7G3ZJ96-F1-model_v4 | GT50 | 15 | 404 | 13 | 417 | 0.7386 |
0.8006 |
| A0A899G0F3 | GT50 | 33 | 400 | 1 | 381 | 0.7286 |
0.7948 |
| UJR26363.1 | GT57 | 28 | 403 | 1 | 484 | 0.7274 |
0.8649 |
| AF-A0A6C1DTW3-F1-model_v4 | GT50 | 23 | 400 | 1 | 396 | 0.7251 |
0.7948 |
| AF-Q7T310-F1-model_v4 | GT50 | 25 | 402 | 1 | 390 | 0.7251 |
0.7843 |
| AF-F0WFQ1-F1-model_v4 | GT57 | 20 | 404 | 1 | 518 | 0.7197 |
0.8616 |
| AF-F0WAS3-F1-model_v4 | GT50 | 20 | 401 | 1 | 403 | 0.715 |
0.7856 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A899G0F3 | GT50 | 33 | 400 | 1 | 381 | 0.7286 |
0.7948 |
| UJR26363.1 | GT57 | 28 | 403 | 1 | 484 | 0.7274 |
0.8649 |
| A0A7R8VBS1 | GT50 | 25 | 403 | 1 | 394 | 0.726 |
0.7854 |
| Q6FXQ5 | GT50 | 28 | 404 | 4 | 419 | 0.7198 |
0.8126 |
| F0WFQ1 | GT57 | 20 | 404 | 1 | 518 | 0.7197 |
0.8616 |
| F0WAS3 | GT50 | 20 | 401 | 1 | 403 | 0.715 |
0.7856 |
| A0A249M539 | GT87 | 12 | 404 | 11 | 402 | 0.7097 |
0.7616 |
| F1L090 | GT57 | 17 | 401 | 9 | 523 | 0.7079 |
0.8552 |
| B6H669 | GT57 | 1 | 404 | 11 | 561 | 0.6994 |
0.8265 |
| A0A2R6XJJ9 | GT57 | 17 | 404 | 1 | 540 | 0.6979 |
0.8401 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CRE7-F1-model_v4 | 20 | 404 | 1 | 402 | 0.7533 |
0.8095 |
| AF-Q7T310-F1-model_v4 | 25 | 402 | 1 | 390 | 0.7257 |
0.7848 |
| AF-Q6FXQ5-F1-model_v4 | 26 | 404 | 3 | 419 | 0.7192 |
0.8083 |
| AF-Q6P8H8-F1-model_v4 | 13 | 404 | 3 | 525 | 0.7123 |
0.8407 |
| AF-Q9BVK2-F1-model_v4 | 13 | 404 | 5 | 526 | 0.7093 |
0.8371 |
| AF-Q54IA4-F1-model_v4 | 12 | 400 | 4 | 436 | 0.7063 |
0.7831 |
| AF-Q0P5D9-F1-model_v4 | 18 | 403 | 4 | 524 | 0.7051 |
0.8442 |
| AF-Q4IJT0-F1-model_v4 | 11 | 396 | 1 | 501 | 0.6965 |
0.8177 |
| AF-Q8NNM0-F1-model_v4 | 24 | 381 | 67 | 460 | 0.608 |
0.7581 |