Cluster: HRGMv2_2399_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- CGC Family ID: CGCFAM_02071
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2399_3 | HRGMv2_2399_3_1 | 114 | 4889 | - | GH39 |
| TC | HRGMv2_2399_3 | HRGMv2_2399_3_2 | 4933 | 5805 | - | 3.A.1.1.34 |
| TC | HRGMv2_2399_3 | HRGMv2_2399_3_3 | 5805 | 6695 | - | 3.A.1.1.42 |
Gene ID: HRGMv2_2399_3_1
Type: CAZyme
Location: 114 - 4889 (-)
Type: CAZyme
Location: 114 - 4889 (-)
Gene ID: HRGMv2_2399_3_2
Type: TC
Location: 4933 - 5805 (-)
Type: TC
Location: 4933 - 5805 (-)
Gene ID: HRGMv2_2399_3_3
Type: TC
Location: 5805 - 6695 (-)
Type: TC
Location: 5805 - 6695 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.