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Cluster: HRGMv2_2399_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_2 HRGMv2_2399_2_115 153866 154621 - 3.A.11.1.4
pfam HRGMv2_2399_2 HRGMv2_2399_2_116 154877 155845 + ABC_sub_bind
TC HRGMv2_2399_2 HRGMv2_2399_2_117 155953 156882 + 3.A.1.34.1
TC HRGMv2_2399_2 HRGMv2_2399_2_118 156876 157673 + 3.A.1.34.1
TC HRGMv2_2399_2 HRGMv2_2399_2_119 157791 159884 - 1.B.52.2.2
pfam HRGMv2_2399_2 HRGMv2_2399_2_120 160493 161431 - ROK
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_121 161524 163551 - GT51
TC HRGMv2_2399_2 HRGMv2_2399_2_122 163548 165056 - 1.C.105.2.8
Gene ID: HRGMv2_2399_2_115
Type: TC
Location: 153866 - 154621 (-)
Gene ID: HRGMv2_2399_2_116
Type: pfam
Location: 154877 - 155845 (+)
Gene ID: HRGMv2_2399_2_117
Type: TC
Location: 155953 - 156882 (+)
Gene ID: HRGMv2_2399_2_118
Type: TC
Location: 156876 - 157673 (+)
Gene ID: HRGMv2_2399_2_119
Type: TC
Location: 157791 - 159884 (-)
Gene ID: HRGMv2_2399_2_120
Type: pfam
Location: 160493 - 161431 (-)
Gene ID: HRGMv2_2399_2_121
Type: CAZyme
Location: 161524 - 163551 (-)
Gene ID: HRGMv2_2399_2_122
Type: TC
Location: 163548 - 165056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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