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Cluster: HRGMv2_2399_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_50 75987 76715 - GT2
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_51 76720 77895 - GT4
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_52 77904 79616 - GT2
TC HRGMv2_2399_2 HRGMv2_2399_2_53 79622 81031 - 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_2399_2 HRGMv2_2399_2_54 81043 81150 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_55 81248 82189 - GT2
pfam HRGMv2_2399_2 HRGMv2_2399_2_56 82191 83420 - Polysacc_synt
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_57 83433 85157 - GT2
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_58 85166 87040 - GT2
Gene ID: HRGMv2_2399_2_50
Type: CAZyme
Location: 75987 - 76715 (-)
Gene ID: HRGMv2_2399_2_51
Type: CAZyme
Location: 76720 - 77895 (-)
Gene ID: HRGMv2_2399_2_52
Type: CAZyme
Location: 77904 - 79616 (-)
Gene ID: HRGMv2_2399_2_53
Type: TC
Location: 79622 - 81031 (-)
Gene ID: HRGMv2_2399_2_54
Type:
Location: 81043 - 81150 (-)
Gene ID: HRGMv2_2399_2_55
Type: CAZyme
Location: 81248 - 82189 (-)
Gene ID: HRGMv2_2399_2_56
Type: pfam
Location: 82191 - 83420 (-)
Gene ID: HRGMv2_2399_2_57
Type: CAZyme
Location: 83433 - 85157 (-)
Gene ID: HRGMv2_2399_2_58
Type: CAZyme
Location: 85166 - 87040 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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