Cluster: HRGMv2_2399_CGC35
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2399_43 | HRGMv2_2399_43_4 | 2206 | 3231 | + | 3.A.1.2.14 |
| TC | HRGMv2_2399_43 | HRGMv2_2399_43_5 | 3247 | 4545 | + | 9.B.34.1.1 |
| CAZyme | HRGMv2_2399_43 | HRGMv2_2399_43_6 | 4561 | 6582 | + | GH42 |
Gene ID: HRGMv2_2399_43_4
Type: TC
Location: 2206 - 3231 (+)
Type: TC
Location: 2206 - 3231 (+)
Gene ID: HRGMv2_2399_43_5
Type: TC
Location: 3247 - 4545 (+)
Type: TC
Location: 3247 - 4545 (+)
Gene ID: HRGMv2_2399_43_6
Type: CAZyme
Location: 4561 - 6582 (+)
Type: CAZyme
Location: 4561 - 6582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.