dbCAN Logo

Cluster: HRGMv2_2399_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_2 HRGMv2_2399_2_14 17406 19109 - 1.B.52.2.1
TF HRGMv2_2399_2 HRGMv2_2399_2_15 19277 20107 + AraC_N | HTH_AraC | HTH_AraC
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_16 20173 22383 - GH36
TC HRGMv2_2399_2 HRGMv2_2399_2_17 22405 23235 - 3.A.1.1.36
TC HRGMv2_2399_2 HRGMv2_2399_2_18 23246 24160 - 3.A.1.1.11
STP HRGMv2_2399_2 HRGMv2_2399_2_19 24238 25584 - SBP_bac_1
TC HRGMv2_2399_2 HRGMv2_2399_2_20 25702 26943 - 1.B.52.2.2
CAZyme HRGMv2_2399_2 HRGMv2_2399_2_21 27059 32824 - CBM35 | CBM35 | CBM35 | GH39
Gene ID: HRGMv2_2399_2_14
Type: TC
Location: 17406 - 19109 (-)
Gene ID: HRGMv2_2399_2_15
Type: TF
Location: 19277 - 20107 (+)
Gene ID: HRGMv2_2399_2_16
Type: CAZyme
Location: 20173 - 22383 (-)
Gene ID: HRGMv2_2399_2_17
Type: TC
Location: 22405 - 23235 (-)
Gene ID: HRGMv2_2399_2_18
Type: TC
Location: 23246 - 24160 (-)
Gene ID: HRGMv2_2399_2_19
Type: STP
Location: 24238 - 25584 (-)
Gene ID: HRGMv2_2399_2_20
Type: TC
Location: 25702 - 26943 (-)
Gene ID: HRGMv2_2399_2_21
Type: CAZyme
Location: 27059 - 32824 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List