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Cluster: HRGMv2_2399_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_22 HRGMv2_2399_22_27 29582 31408 - 3.A.1.120.6
CAZyme HRGMv2_2399_22 HRGMv2_2399_22_28 31596 35285 - GH43_27
pfam HRGMv2_2399_22 HRGMv2_2399_22_29 35551 36834 - Asp_aminotransf
STP HRGMv2_2399_22 HRGMv2_2399_22_30 36846 38174 - AAA
CAZyme HRGMv2_2399_22 HRGMv2_2399_22_31 38348 39064 - CE4
TC HRGMv2_2399_22 HRGMv2_2399_22_32 39212 41800 - 3.A.9.1.2
TC HRGMv2_2399_22 HRGMv2_2399_22_33 41895 43631 - 3.A.1.106.11
TC HRGMv2_2399_22 HRGMv2_2399_22_34 43628 45367 - 3.A.1.106.12
Gene ID: HRGMv2_2399_22_27
Type: TC
Location: 29582 - 31408 (-)
Gene ID: HRGMv2_2399_22_28
Type: CAZyme
Location: 31596 - 35285 (-)
Gene ID: HRGMv2_2399_22_29
Type: pfam
Location: 35551 - 36834 (-)
Gene ID: HRGMv2_2399_22_30
Type: STP
Location: 36846 - 38174 (-)
Gene ID: HRGMv2_2399_22_31
Type: CAZyme
Location: 38348 - 39064 (-)
Gene ID: HRGMv2_2399_22_32
Type: TC
Location: 39212 - 41800 (-)
Gene ID: HRGMv2_2399_22_33
Type: TC
Location: 41895 - 43631 (-)
Gene ID: HRGMv2_2399_22_34
Type: TC
Location: 43628 - 45367 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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