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Cluster: HRGMv2_2399_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_21 HRGMv2_2399_21_36 35571 36956 + 2.A.40.1.2
TC HRGMv2_2399_21 HRGMv2_2399_21_37 37083 37937 - 3.A.1.132.3
CAZyme HRGMv2_2399_21 HRGMv2_2399_21_38 38142 41450 - GH43_22
TC HRGMv2_2399_21 HRGMv2_2399_21_39 41543 42637 - 8.A.59.4.2
pfam HRGMv2_2399_21 HRGMv2_2399_21_40 42634 43002 - Hpt
pfam HRGMv2_2399_21 HRGMv2_2399_21_41 43092 43862 - adh_short | Epimerase | KR | adh_short_C2
TC HRGMv2_2399_21 HRGMv2_2399_21_42 43999 45183 - 2.A.36.2.1
Gene ID: HRGMv2_2399_21_36
Type: TC
Location: 35571 - 36956 (+)
Gene ID: HRGMv2_2399_21_37
Type: TC
Location: 37083 - 37937 (-)
Gene ID: HRGMv2_2399_21_38
Type: CAZyme
Location: 38142 - 41450 (-)
Gene ID: HRGMv2_2399_21_39
Type: TC
Location: 41543 - 42637 (-)
Gene ID: HRGMv2_2399_21_40
Type: pfam
Location: 42634 - 43002 (-)
Gene ID: HRGMv2_2399_21_41
Type: pfam
Location: 43092 - 43862 (-)
Gene ID: HRGMv2_2399_21_42
Type: TC
Location: 43999 - 45183 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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