Cluster: HRGMv2_2399_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2399
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2399_20 | HRGMv2_2399_20_25 | 33058 | 34413 | - | 2.A.22.5.3 |
| NULL(UNKNOWN) | HRGMv2_2399_20 | HRGMv2_2399_20_26 | 34523 | 34672 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2399_20 | HRGMv2_2399_20_27 | 34706 | 37177 | - | GT35 |
| pfam | HRGMv2_2399_20 | HRGMv2_2399_20_28 | 37264 | 40422 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| CAZyme | HRGMv2_2399_20 | HRGMv2_2399_20_29 | 40820 | 41836 | - | GT2 |
Gene ID: HRGMv2_2399_20_25
Type: TC
Location: 33058 - 34413 (-)
Type: TC
Location: 33058 - 34413 (-)
Gene ID: HRGMv2_2399_20_26
Type:
Location: 34523 - 34672 (-)
Type:
Location: 34523 - 34672 (-)
Gene ID: HRGMv2_2399_20_27
Type: CAZyme
Location: 34706 - 37177 (-)
Type: CAZyme
Location: 34706 - 37177 (-)
Gene ID: HRGMv2_2399_20_28
Type: pfam
Location: 37264 - 40422 (-)
Type: pfam
Location: 37264 - 40422 (-)
Gene ID: HRGMv2_2399_20_29
Type: CAZyme
Location: 40820 - 41836 (-)
Type: CAZyme
Location: 40820 - 41836 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.