Cluster: HRGMv2_2399_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2399_16 | HRGMv2_2399_16_7 | 11031 | 12341 | - | GH13_20 |
| pfam | HRGMv2_2399_16 | HRGMv2_2399_16_8 | 12359 | 12541 | - | DUF4250 |
| pfam | HRGMv2_2399_16 | HRGMv2_2399_16_9 | 12534 | 13289 | - | Rotamase | Rotamase_2 | Rotamase_3 |
| TC | HRGMv2_2399_16 | HRGMv2_2399_16_10 | 13319 | 14119 | - | 3.A.1.15.13 |
| TC | HRGMv2_2399_16 | HRGMv2_2399_16_11 | 14110 | 14928 | - | 3.A.1.15.5 |
| TC | HRGMv2_2399_16 | HRGMv2_2399_16_12 | 14930 | 15994 | - | 3.A.1.15.3 |
Gene ID: HRGMv2_2399_16_7
Type: CAZyme
Location: 11031 - 12341 (-)
Type: CAZyme
Location: 11031 - 12341 (-)
Gene ID: HRGMv2_2399_16_8
Type: pfam
Location: 12359 - 12541 (-)
Type: pfam
Location: 12359 - 12541 (-)
Gene ID: HRGMv2_2399_16_9
Type: pfam
Location: 12534 - 13289 (-)
Type: pfam
Location: 12534 - 13289 (-)
Gene ID: HRGMv2_2399_16_10
Type: TC
Location: 13319 - 14119 (-)
Type: TC
Location: 13319 - 14119 (-)
Gene ID: HRGMv2_2399_16_11
Type: TC
Location: 14110 - 14928 (-)
Type: TC
Location: 14110 - 14928 (-)
Gene ID: HRGMv2_2399_16_12
Type: TC
Location: 14930 - 15994 (-)
Type: TC
Location: 14930 - 15994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.