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Cluster: HRGMv2_2399_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_15 HRGMv2_2399_15_47 52354 53682 + 9.A.40.2.2
peptidase HRGMv2_2399_15 HRGMv2_2399_15_48 53717 54445 + M20.UNW
STP HRGMv2_2399_15 HRGMv2_2399_15_49 54522 55805 + Aminotran_1_2
CAZyme HRGMv2_2399_15 HRGMv2_2399_15_50 55825 57276 + GT5
peptidase HRGMv2_2399_15 HRGMv2_2399_15_51 57385 58059 + S14.UPW
pfam HRGMv2_2399_15 HRGMv2_2399_15_52 58165 59040 + BacA
TC HRGMv2_2399_15 HRGMv2_2399_15_53 59090 61765 + 3.A.12.1.1
Gene ID: HRGMv2_2399_15_47
Type: TC
Location: 52354 - 53682 (+)
Gene ID: HRGMv2_2399_15_48
Type: peptidase
Location: 53717 - 54445 (+)
Gene ID: HRGMv2_2399_15_49
Type: STP
Location: 54522 - 55805 (+)
Gene ID: HRGMv2_2399_15_50
Type: CAZyme
Location: 55825 - 57276 (+)
Gene ID: HRGMv2_2399_15_51
Type: peptidase
Location: 57385 - 58059 (+)
Gene ID: HRGMv2_2399_15_52
Type: pfam
Location: 58165 - 59040 (+)
Gene ID: HRGMv2_2399_15_53
Type: TC
Location: 59090 - 61765 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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