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Cluster: HRGMv2_2399_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_14 HRGMv2_2399_14_13 19651 21093 + 9.B.33.1.1
TC HRGMv2_2399_14 HRGMv2_2399_14_14 21263 22330 + 3.A.1.2.1
TC HRGMv2_2399_14 HRGMv2_2399_14_15 22458 23972 + 3.A.1.2.23
TC HRGMv2_2399_14 HRGMv2_2399_14_16 23975 25057 + 3.A.1.2.25
TC HRGMv2_2399_14 HRGMv2_2399_14_17 25060 26079 + 3.A.1.2.14
TC HRGMv2_2399_14 HRGMv2_2399_14_18 26194 27903 + 1.B.52.2.2
TC HRGMv2_2399_14 HRGMv2_2399_14_19 27953 29011 + 3.A.1.2.25
TF HRGMv2_2399_14 HRGMv2_2399_14_20 29008 30489 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2399_14 HRGMv2_2399_14_21 30872 34291 + CBM22 | GH43_16
CAZyme HRGMv2_2399_14 HRGMv2_2399_14_22 34412 36421 + GH10
pfam HRGMv2_2399_14 HRGMv2_2399_14_23 36525 37028 + DUF6106
pfam HRGMv2_2399_14 HRGMv2_2399_14_24 37036 38193 - Glyco_trans_1_2
TC HRGMv2_2399_14 HRGMv2_2399_14_25 38407 39138 + 3.A.1.25.6
Gene ID: HRGMv2_2399_14_13
Type: TC
Location: 19651 - 21093 (+)
Gene ID: HRGMv2_2399_14_14
Type: TC
Location: 21263 - 22330 (+)
Gene ID: HRGMv2_2399_14_15
Type: TC
Location: 22458 - 23972 (+)
Gene ID: HRGMv2_2399_14_16
Type: TC
Location: 23975 - 25057 (+)
Gene ID: HRGMv2_2399_14_17
Type: TC
Location: 25060 - 26079 (+)
Gene ID: HRGMv2_2399_14_18
Type: TC
Location: 26194 - 27903 (+)
Gene ID: HRGMv2_2399_14_19
Type: TC
Location: 27953 - 29011 (+)
Gene ID: HRGMv2_2399_14_20
Type: TF
Location: 29008 - 30489 (+)
Gene ID: HRGMv2_2399_14_21
Type: CAZyme
Location: 30872 - 34291 (+)
Gene ID: HRGMv2_2399_14_22
Type: CAZyme
Location: 34412 - 36421 (+)
Gene ID: HRGMv2_2399_14_23
Type: pfam
Location: 36525 - 37028 (+)
Gene ID: HRGMv2_2399_14_24
Type: pfam
Location: 37036 - 38193 (-)
Gene ID: HRGMv2_2399_14_25
Type: TC
Location: 38407 - 39138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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