Cluster: HRGMv2_2399_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2399_7 | HRGMv2_2399_7_43 | 58414 | 59673 | + | 2.A.86.1.8 |
| STP | HRGMv2_2399_7 | HRGMv2_2399_7_44 | 59819 | 62365 | + | TPR_2 |
| CAZyme | HRGMv2_2399_7 | HRGMv2_2399_7_45 | 62421 | 64328 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_2399_7_43
Type: TC
Location: 58414 - 59673 (+)
Type: TC
Location: 58414 - 59673 (+)
Gene ID: HRGMv2_2399_7_44
Type: STP
Location: 59819 - 62365 (+)
Type: STP
Location: 59819 - 62365 (+)
Gene ID: HRGMv2_2399_7_45
Type: CAZyme
Location: 62421 - 64328 (+)
Type: CAZyme
Location: 62421 - 64328 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.