Cluster: HRGMv2_2399_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- CGC Family ID: CGCFAM_05248
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2399_7 | HRGMv2_2399_7_8 | 10158 | 16154 | + | CBM22 | CBM22 | CBM22 | CBM6 | CBM91 | GH43_10 | GH43_16 |
| TC | HRGMv2_2399_7 | HRGMv2_2399_7_9 | 16324 | 18072 | + | 8.A.59.2.1 |
| TF | HRGMv2_2399_7 | HRGMv2_2399_7_10 | 18100 | 19659 | + | HTH_AraC |
| TC | HRGMv2_2399_7 | HRGMv2_2399_7_11 | 19663 | 21312 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_2399_7_8
Type: CAZyme
Location: 10158 - 16154 (+)
Type: CAZyme
Location: 10158 - 16154 (+)
Gene ID: HRGMv2_2399_7_9
Type: TC
Location: 16324 - 18072 (+)
Type: TC
Location: 16324 - 18072 (+)
Gene ID: HRGMv2_2399_7_10
Type: TF
Location: 18100 - 19659 (+)
Type: TF
Location: 18100 - 19659 (+)
Gene ID: HRGMv2_2399_7_11
Type: TC
Location: 19663 - 21312 (+)
Type: TC
Location: 19663 - 21312 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.