Cluster: HRGMv2_2399_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2399_6 | HRGMv2_2399_6_70 | 101798 | 102244 | - | 3.A.1.134.4 |
| TC | HRGMv2_2399_6 | HRGMv2_2399_6_71 | 102281 | 102784 | - | 2.A.1.38.2 |
| STP | HRGMv2_2399_6 | HRGMv2_2399_6_72 | 102900 | 103520 | - | TetR_N |
| pfam | HRGMv2_2399_6 | HRGMv2_2399_6_73 | 103853 | 104677 | - | PDDEXK_2 |
| CAZyme | HRGMv2_2399_6 | HRGMv2_2399_6_74 | 104979 | 107138 | - | GH112 |
Gene ID: HRGMv2_2399_6_70
Type: TC
Location: 101798 - 102244 (-)
Type: TC
Location: 101798 - 102244 (-)
Gene ID: HRGMv2_2399_6_71
Type: TC
Location: 102281 - 102784 (-)
Type: TC
Location: 102281 - 102784 (-)
Gene ID: HRGMv2_2399_6_72
Type: STP
Location: 102900 - 103520 (-)
Type: STP
Location: 102900 - 103520 (-)
Gene ID: HRGMv2_2399_6_73
Type: pfam
Location: 103853 - 104677 (-)
Type: pfam
Location: 103853 - 104677 (-)
Gene ID: HRGMv2_2399_6_74
Type: CAZyme
Location: 104979 - 107138 (-)
Type: CAZyme
Location: 104979 - 107138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.