Cluster: HRGMv2_2399_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2399
- CGC Family ID: CGCFAM_04715
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2399_4 | HRGMv2_2399_4_113 | 96774 | 97520 | + | GH24 |
| pfam | HRGMv2_2399_4 | HRGMv2_2399_4_114 | 97771 | 99270 | + | Biotin_lipoyl_2 |
| TC | HRGMv2_2399_4 | HRGMv2_2399_4_115 | 99267 | 100097 | + | 3.A.1.122.2 |
| NULL(UNKNOWN) | HRGMv2_2399_4 | HRGMv2_2399_4_116 | 100081 | 101988 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2399_4 | HRGMv2_2399_4_117 | 102004 | 103257 | + | 3.A.1.122.2 |
Gene ID: HRGMv2_2399_4_113
Type: CAZyme
Location: 96774 - 97520 (+)
Type: CAZyme
Location: 96774 - 97520 (+)
Gene ID: HRGMv2_2399_4_114
Type: pfam
Location: 97771 - 99270 (+)
Type: pfam
Location: 97771 - 99270 (+)
Gene ID: HRGMv2_2399_4_115
Type: TC
Location: 99267 - 100097 (+)
Type: TC
Location: 99267 - 100097 (+)
Gene ID: HRGMv2_2399_4_116
Type:
Location: 100081 - 101988 (+)
Type:
Location: 100081 - 101988 (+)
Gene ID: HRGMv2_2399_4_117
Type: TC
Location: 102004 - 103257 (+)
Type: TC
Location: 102004 - 103257 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_B
Species
Roseburia_B zhanii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.