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Cluster: HRGMv2_2399_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2399_3 HRGMv2_2399_3_52 62777 64084 - 9.B.174.1.1
STP HRGMv2_2399_3 HRGMv2_2399_3_53 64360 65670 - Peptidase_M23
pfam HRGMv2_2399_3 HRGMv2_2399_3_54 65705 66613 - FtsX | FtsX_ECD
TC HRGMv2_2399_3 HRGMv2_2399_3_55 66603 67283 - 3.A.1.140.1
pfam HRGMv2_2399_3 HRGMv2_2399_3_56 67336 68421 - HTH_30 | GGDEF_2
TC HRGMv2_2399_3 HRGMv2_2399_3_57 68671 69540 - 2.A.115.1.5
CAZyme HRGMv2_2399_3 HRGMv2_2399_3_58 69543 70229 - GT26
pfam HRGMv2_2399_3 HRGMv2_2399_3_59 70297 71502 - ALGX
TC HRGMv2_2399_3 HRGMv2_2399_3_60 71526 72947 - 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_2399_3 HRGMv2_2399_3_61 72948 74045 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2399_3 HRGMv2_2399_3_62 74144 76465 - GT2
CAZyme HRGMv2_2399_3 HRGMv2_2399_3_63 76462 77556 - GH5_4
TC HRGMv2_2399_3 HRGMv2_2399_3_64 77688 79706 - 4.A.1.1.14
pfam HRGMv2_2399_3 HRGMv2_2399_3_65 79782 80687 - N6_N4_Mtase
pfam HRGMv2_2399_3 HRGMv2_2399_3_66 80696 81580 - RE_HindIII
TC HRGMv2_2399_3 HRGMv2_2399_3_67 81679 82371 - 2.A.122.1.4
TC HRGMv2_2399_3 HRGMv2_2399_3_68 82368 82727 - 1.E.14.1.1
sulfatase HRGMv2_2399_3 HRGMv2_2399_3_69 82927 83685 + S1_9
CAZyme HRGMv2_2399_3 HRGMv2_2399_3_70 83682 84812 + CE9
TF HRGMv2_2399_3 HRGMv2_2399_3_71 84809 85561 - HTH_AraC
TC HRGMv2_2399_3 HRGMv2_2399_3_72 85679 87421 + 8.A.59.2.1
STP HRGMv2_2399_3 HRGMv2_2399_3_73 87418 88962 - SBP_bac_1
CAZyme HRGMv2_2399_3 HRGMv2_2399_3_74 89045 92605 - GH53
pfam HRGMv2_2399_3 HRGMv2_2399_3_75 92884 95871 - PI-PLC-X | Flg_new | Laminin_G_3 | aBig_2
CAZyme HRGMv2_2399_3 HRGMv2_2399_3_76 96057 98312 - GT35
TF HRGMv2_2399_3 HRGMv2_2399_3_77 98441 99316 + HTH_AraC | HTH_AraC
TC HRGMv2_2399_3 HRGMv2_2399_3_78 99323 100594 + 9.A.40.2.2
Gene ID: HRGMv2_2399_3_52
Type: TC
Location: 62777 - 64084 (-)
Gene ID: HRGMv2_2399_3_53
Type: STP
Location: 64360 - 65670 (-)
Gene ID: HRGMv2_2399_3_54
Type: pfam
Location: 65705 - 66613 (-)
Gene ID: HRGMv2_2399_3_55
Type: TC
Location: 66603 - 67283 (-)
Gene ID: HRGMv2_2399_3_56
Type: pfam
Location: 67336 - 68421 (-)
Gene ID: HRGMv2_2399_3_57
Type: TC
Location: 68671 - 69540 (-)
Gene ID: HRGMv2_2399_3_58
Type: CAZyme
Location: 69543 - 70229 (-)
Gene ID: HRGMv2_2399_3_59
Type: pfam
Location: 70297 - 71502 (-)
Gene ID: HRGMv2_2399_3_60
Type: TC
Location: 71526 - 72947 (-)
Gene ID: HRGMv2_2399_3_61
Type:
Location: 72948 - 74045 (-)
Gene ID: HRGMv2_2399_3_62
Type: CAZyme
Location: 74144 - 76465 (-)
Gene ID: HRGMv2_2399_3_63
Type: CAZyme
Location: 76462 - 77556 (-)
Gene ID: HRGMv2_2399_3_64
Type: TC
Location: 77688 - 79706 (-)
Gene ID: HRGMv2_2399_3_65
Type: pfam
Location: 79782 - 80687 (-)
Gene ID: HRGMv2_2399_3_66
Type: pfam
Location: 80696 - 81580 (-)
Gene ID: HRGMv2_2399_3_67
Type: TC
Location: 81679 - 82371 (-)
Gene ID: HRGMv2_2399_3_68
Type: TC
Location: 82368 - 82727 (-)
Gene ID: HRGMv2_2399_3_69
Type: sulfatase
Location: 82927 - 83685 (+)
Gene ID: HRGMv2_2399_3_70
Type: CAZyme
Location: 83682 - 84812 (+)
Gene ID: HRGMv2_2399_3_71
Type: TF
Location: 84809 - 85561 (-)
Gene ID: HRGMv2_2399_3_72
Type: TC
Location: 85679 - 87421 (+)
Gene ID: HRGMv2_2399_3_73
Type: STP
Location: 87418 - 88962 (-)
Gene ID: HRGMv2_2399_3_74
Type: CAZyme
Location: 89045 - 92605 (-)
Gene ID: HRGMv2_2399_3_75
Type: pfam
Location: 92884 - 95871 (-)
Gene ID: HRGMv2_2399_3_76
Type: CAZyme
Location: 96057 - 98312 (-)
Gene ID: HRGMv2_2399_3_77
Type: TF
Location: 98441 - 99316 (+)
Gene ID: HRGMv2_2399_3_78
Type: TC
Location: 99323 - 100594 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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