dbCAN Logo

Cluster: HRGMv2_2393_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2393_29 HRGMv2_2393_29_24 30389 31348 + 3.A.1.147.3
TC HRGMv2_2393_29 HRGMv2_2393_29_25 31326 32222 + 3.A.1.132.7
pfam HRGMv2_2393_29 HRGMv2_2393_29_26 32215 33051 + AP_endonuc_2
CAZyme HRGMv2_2393_29 HRGMv2_2393_29_27 33197 34609 - GH1
TC HRGMv2_2393_29 HRGMv2_2393_29_28 35185 37158 + 4.A.1.2.6
CAZyme HRGMv2_2393_29 HRGMv2_2393_29_29 37246 38673 + GH1
pfam HRGMv2_2393_29 HRGMv2_2393_29_30 38711 39556 + PRD | PRD | CAT_RBD
sulfatase HRGMv2_2393_29 HRGMv2_2393_29_31 39752 41002 - S3
TC HRGMv2_2393_29 HRGMv2_2393_29_32 41175 43043 - 9.A.8.1.5
Gene ID: HRGMv2_2393_29_24
Type: TC
Location: 30389 - 31348 (+)
Gene ID: HRGMv2_2393_29_25
Type: TC
Location: 31326 - 32222 (+)
Gene ID: HRGMv2_2393_29_26
Type: pfam
Location: 32215 - 33051 (+)
Gene ID: HRGMv2_2393_29_27
Type: CAZyme
Location: 33197 - 34609 (-)
Gene ID: HRGMv2_2393_29_28
Type: TC
Location: 35185 - 37158 (+)
Gene ID: HRGMv2_2393_29_29
Type: CAZyme
Location: 37246 - 38673 (+)
Gene ID: HRGMv2_2393_29_30
Type: pfam
Location: 38711 - 39556 (+)
Gene ID: HRGMv2_2393_29_31
Type: sulfatase
Location: 39752 - 41002 (-)
Gene ID: HRGMv2_2393_29_32
Type: TC
Location: 41175 - 43043 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List