Cluster: HRGMv2_2393_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2393
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2393_18 | HRGMv2_2393_18_2 | 1800 | 3077 | - | 2.A.47.4.7 |
| pfam | HRGMv2_2393_18 | HRGMv2_2393_18_3 | 3099 | 3935 | - | Lactamase_B |
| TF | HRGMv2_2393_18 | HRGMv2_2393_18_4 | 4287 | 5216 | + | HTH_1 |
| CAZyme | HRGMv2_2393_18 | HRGMv2_2393_18_5 | 5469 | 6608 | - | CE9 |
Gene ID: HRGMv2_2393_18_2
Type: TC
Location: 1800 - 3077 (-)
Type: TC
Location: 1800 - 3077 (-)
Gene ID: HRGMv2_2393_18_3
Type: pfam
Location: 3099 - 3935 (-)
Type: pfam
Location: 3099 - 3935 (-)
Gene ID: HRGMv2_2393_18_4
Type: TF
Location: 4287 - 5216 (+)
Type: TF
Location: 4287 - 5216 (+)
Gene ID: HRGMv2_2393_18_5
Type: CAZyme
Location: 5469 - 6608 (-)
Type: CAZyme
Location: 5469 - 6608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.