Cluster: HRGMv2_2393_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2393
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2393_145 | HRGMv2_2393_145_12 | 5644 | 6324 | + | CE4 |
| STP | HRGMv2_2393_145 | HRGMv2_2393_145_13 | 6339 | 7673 | + | AAA |
| pfam | HRGMv2_2393_145 | HRGMv2_2393_145_14 | 7670 | 8977 | + | Phosphodiest |
| TC | HRGMv2_2393_145 | HRGMv2_2393_145_15 | 9055 | 10719 | + | 3.A.6.1.1 |
Gene ID: HRGMv2_2393_145_12
Type: CAZyme
Location: 5644 - 6324 (+)
Type: CAZyme
Location: 5644 - 6324 (+)
Gene ID: HRGMv2_2393_145_13
Type: STP
Location: 6339 - 7673 (+)
Type: STP
Location: 6339 - 7673 (+)
Gene ID: HRGMv2_2393_145_14
Type: pfam
Location: 7670 - 8977 (+)
Type: pfam
Location: 7670 - 8977 (+)
Gene ID: HRGMv2_2393_145_15
Type: TC
Location: 9055 - 10719 (+)
Type: TC
Location: 9055 - 10719 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.