Cluster: HRGMv2_2393_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2393
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2393_79 | HRGMv2_2393_79_30 | 33686 | 34786 | + | 8.A.59.4.1 |
| pfam | HRGMv2_2393_79 | HRGMv2_2393_79_31 | 34787 | 35140 | + | Hpt |
| STP | HRGMv2_2393_79 | HRGMv2_2393_79_32 | 35147 | 37678 | + | HATPase_c | HisKA | Response_reg | dCache_1 |
| CAZyme | HRGMv2_2393_79 | HRGMv2_2393_79_33 | 38067 | 40763 | + | CBM48 | GH13_9 |
| TC | HRGMv2_2393_79 | HRGMv2_2393_79_34 | 40790 | 41626 | + | 1.A.23.2.1 |
| CAZyme | HRGMv2_2393_79 | HRGMv2_2393_79_35 | 41623 | 43122 | + | GH77 |
Gene ID: HRGMv2_2393_79_30
Type: TC
Location: 33686 - 34786 (+)
Type: TC
Location: 33686 - 34786 (+)
Gene ID: HRGMv2_2393_79_31
Type: pfam
Location: 34787 - 35140 (+)
Type: pfam
Location: 34787 - 35140 (+)
Gene ID: HRGMv2_2393_79_32
Type: STP
Location: 35147 - 37678 (+)
Type: STP
Location: 35147 - 37678 (+)
Gene ID: HRGMv2_2393_79_33
Type: CAZyme
Location: 38067 - 40763 (+)
Type: CAZyme
Location: 38067 - 40763 (+)
Gene ID: HRGMv2_2393_79_34
Type: TC
Location: 40790 - 41626 (+)
Type: TC
Location: 40790 - 41626 (+)
Gene ID: HRGMv2_2393_79_35
Type: CAZyme
Location: 41623 - 43122 (+)
Type: CAZyme
Location: 41623 - 43122 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.