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Cluster: HRGMv2_2393_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2393_42 HRGMv2_2393_42_10 9683 12016 + GH129
pfam HRGMv2_2393_42 HRGMv2_2393_42_11 11983 12501 - Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_2393_42 HRGMv2_2393_42_12 12722 13354 + 2.A.115.2.14
TC HRGMv2_2393_42 HRGMv2_2393_42_13 13770 14501 + 3.A.1.3.16
TC HRGMv2_2393_42 HRGMv2_2393_42_14 14540 15370 + 3.A.1.3.16
TC HRGMv2_2393_42 HRGMv2_2393_42_15 15391 16128 + 3.A.1.3.16
TC HRGMv2_2393_42 HRGMv2_2393_42_16 16121 16828 + 3.A.1.3.16
Gene ID: HRGMv2_2393_42_10
Type: CAZyme
Location: 9683 - 12016 (+)
Gene ID: HRGMv2_2393_42_11
Type: pfam
Location: 11983 - 12501 (-)
Gene ID: HRGMv2_2393_42_12
Type: TC
Location: 12722 - 13354 (+)
Gene ID: HRGMv2_2393_42_13
Type: TC
Location: 13770 - 14501 (+)
Gene ID: HRGMv2_2393_42_14
Type: TC
Location: 14540 - 15370 (+)
Gene ID: HRGMv2_2393_42_15
Type: TC
Location: 15391 - 16128 (+)
Gene ID: HRGMv2_2393_42_16
Type: TC
Location: 16121 - 16828 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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