Cluster: HRGMv2_2390_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_2 | HRGMv2_2390_2_76 | 92063 | 93442 | + | 3.A.1.1.27 |
| TC | HRGMv2_2390_2 | HRGMv2_2390_2_77 | 93445 | 94317 | + | 3.A.1.1.27 |
| CAZyme | HRGMv2_2390_2 | HRGMv2_2390_2_78 | 94516 | 96555 | + | GH13_14 |
| CAZyme | HRGMv2_2390_2 | HRGMv2_2390_2_79 | 96552 | 98603 | + | GH133 |
| CAZyme | HRGMv2_2390_2 | HRGMv2_2390_2_80 | 98624 | 100375 | + | CBM34 | GH13_20 |
| CAZyme | HRGMv2_2390_2 | HRGMv2_2390_2_81 | 100379 | 102016 | + | GH13_31 |
Gene ID: HRGMv2_2390_2_76
Type: TC
Location: 92063 - 93442 (+)
Type: TC
Location: 92063 - 93442 (+)
Gene ID: HRGMv2_2390_2_77
Type: TC
Location: 93445 - 94317 (+)
Type: TC
Location: 93445 - 94317 (+)
Gene ID: HRGMv2_2390_2_78
Type: CAZyme
Location: 94516 - 96555 (+)
Type: CAZyme
Location: 94516 - 96555 (+)
Gene ID: HRGMv2_2390_2_79
Type: CAZyme
Location: 96552 - 98603 (+)
Type: CAZyme
Location: 96552 - 98603 (+)
Gene ID: HRGMv2_2390_2_80
Type: CAZyme
Location: 98624 - 100375 (+)
Type: CAZyme
Location: 98624 - 100375 (+)
Gene ID: HRGMv2_2390_2_81
Type: CAZyme
Location: 100379 - 102016 (+)
Type: CAZyme
Location: 100379 - 102016 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.