Cluster: HRGMv2_2390_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2390_1 | HRGMv2_2390_1_185 | 200531 | 203185 | + | GH136 |
| pfam | HRGMv2_2390_1 | HRGMv2_2390_1_186 | 203192 | 204280 | + | FIVAR | FIVAR | FIVAR |
| pfam | HRGMv2_2390_1 | HRGMv2_2390_1_187 | 204408 | 205433 | + | Aminotran_4 |
| TC | HRGMv2_2390_1 | HRGMv2_2390_1_188 | 205607 | 206938 | - | 1.A.26.1.2 |
Gene ID: HRGMv2_2390_1_185
Type: CAZyme
Location: 200531 - 203185 (+)
Type: CAZyme
Location: 200531 - 203185 (+)
Gene ID: HRGMv2_2390_1_186
Type: pfam
Location: 203192 - 204280 (+)
Type: pfam
Location: 203192 - 204280 (+)
Gene ID: HRGMv2_2390_1_187
Type: pfam
Location: 204408 - 205433 (+)
Type: pfam
Location: 204408 - 205433 (+)
Gene ID: HRGMv2_2390_1_188
Type: TC
Location: 205607 - 206938 (-)
Type: TC
Location: 205607 - 206938 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.