Cluster: HRGMv2_2390_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2390_30 | HRGMv2_2390_30_20 | 17519 | 18823 | - | GT4 |
| pfam | HRGMv2_2390_30 | HRGMv2_2390_30_21 | 18861 | 19370 | - | VTT_dom |
| STP | HRGMv2_2390_30 | HRGMv2_2390_30_22 | 19515 | 20102 | - | Pribosyltran |
| TC | HRGMv2_2390_30 | HRGMv2_2390_30_23 | 20105 | 20884 | - | 9.B.28.1.2 |
Gene ID: HRGMv2_2390_30_20
Type: CAZyme
Location: 17519 - 18823 (-)
Type: CAZyme
Location: 17519 - 18823 (-)
Gene ID: HRGMv2_2390_30_21
Type: pfam
Location: 18861 - 19370 (-)
Type: pfam
Location: 18861 - 19370 (-)
Gene ID: HRGMv2_2390_30_22
Type: STP
Location: 19515 - 20102 (-)
Type: STP
Location: 19515 - 20102 (-)
Gene ID: HRGMv2_2390_30_23
Type: TC
Location: 20105 - 20884 (-)
Type: TC
Location: 20105 - 20884 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.