Cluster: HRGMv2_2390_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_26 | HRGMv2_2390_26_21 | 20431 | 21225 | - | 2.A.102.4.4 |
| sulfatase | HRGMv2_2390_26 | HRGMv2_2390_26_22 | 21468 | 22928 | + | S1_46 |
| TF | HRGMv2_2390_26 | HRGMv2_2390_26_23 | 23138 | 23971 | + | HTH_AraC |
| CAZyme | HRGMv2_2390_26 | HRGMv2_2390_26_24 | 24058 | 26220 | - | GH112 |
| TC | HRGMv2_2390_26 | HRGMv2_2390_26_25 | 26295 | 27167 | - | 3.A.1.1.18 |
| TC | HRGMv2_2390_26 | HRGMv2_2390_26_26 | 27190 | 28083 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_2390_26_21
Type: TC
Location: 20431 - 21225 (-)
Type: TC
Location: 20431 - 21225 (-)
Gene ID: HRGMv2_2390_26_22
Type: sulfatase
Location: 21468 - 22928 (+)
Type: sulfatase
Location: 21468 - 22928 (+)
Gene ID: HRGMv2_2390_26_23
Type: TF
Location: 23138 - 23971 (+)
Type: TF
Location: 23138 - 23971 (+)
Gene ID: HRGMv2_2390_26_24
Type: CAZyme
Location: 24058 - 26220 (-)
Type: CAZyme
Location: 24058 - 26220 (-)
Gene ID: HRGMv2_2390_26_25
Type: TC
Location: 26295 - 27167 (-)
Type: TC
Location: 26295 - 27167 (-)
Gene ID: HRGMv2_2390_26_26
Type: TC
Location: 27190 - 28083 (-)
Type: TC
Location: 27190 - 28083 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.