Cluster: HRGMv2_2390_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_22 | HRGMv2_2390_22_32 | 34712 | 35479 | + | 3.A.1.17.13 |
| pfam | HRGMv2_2390_22 | HRGMv2_2390_22_33 | 35472 | 36269 | + | BPD_transp_1 |
| CAZyme | HRGMv2_2390_22 | HRGMv2_2390_22_34 | 36372 | 42884 | - | GH101 |
| TC | HRGMv2_2390_22 | HRGMv2_2390_22_35 | 43264 | 44634 | - | 2.A.22.5.3 |
Gene ID: HRGMv2_2390_22_32
Type: TC
Location: 34712 - 35479 (+)
Type: TC
Location: 34712 - 35479 (+)
Gene ID: HRGMv2_2390_22_33
Type: pfam
Location: 35472 - 36269 (+)
Type: pfam
Location: 35472 - 36269 (+)
Gene ID: HRGMv2_2390_22_34
Type: CAZyme
Location: 36372 - 42884 (-)
Type: CAZyme
Location: 36372 - 42884 (-)
Gene ID: HRGMv2_2390_22_35
Type: TC
Location: 43264 - 44634 (-)
Type: TC
Location: 43264 - 44634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.