Cluster: HRGMv2_2390_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2390
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2390_16 | HRGMv2_2390_16_6 | 4340 | 5671 | - | 2.A.66.1.33 |
| TC | HRGMv2_2390_16 | HRGMv2_2390_16_7 | 5672 | 6334 | - | 2.A.115.2.8 |
| pfam | HRGMv2_2390_16 | HRGMv2_2390_16_8 | 6539 | 6991 | - | HSP20 | ArsA_HSP20 |
| STP | HRGMv2_2390_16 | HRGMv2_2390_16_9 | 7370 | 7903 | - | TetR_N |
| CAZyme | HRGMv2_2390_16 | HRGMv2_2390_16_10 | 8165 | 9958 | + | GH13_9 |
Gene ID: HRGMv2_2390_16_6
Type: TC
Location: 4340 - 5671 (-)
Type: TC
Location: 4340 - 5671 (-)
Gene ID: HRGMv2_2390_16_7
Type: TC
Location: 5672 - 6334 (-)
Type: TC
Location: 5672 - 6334 (-)
Gene ID: HRGMv2_2390_16_8
Type: pfam
Location: 6539 - 6991 (-)
Type: pfam
Location: 6539 - 6991 (-)
Gene ID: HRGMv2_2390_16_9
Type: STP
Location: 7370 - 7903 (-)
Type: STP
Location: 7370 - 7903 (-)
Gene ID: HRGMv2_2390_16_10
Type: CAZyme
Location: 8165 - 9958 (+)
Type: CAZyme
Location: 8165 - 9958 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.